Supplementary material for F-box manuscript, Yang et al.
- Supplemental Figure S1
- A reconciled phylogenetic tree constructed by combining the gene tree
(Fig. 1) and species tree (Oryza, (Arabidopsis, Populus)).
- Supplemental Figure S2
- A reconciled phylogenetic tree for F-box genes in Vitis, Carica, and
Populus constructed by combining the gene tree and species tree (Vitis,
(Carica, Populus)).
- Supplemental Figure S3
- Ortholog clades of some well-characterized Arabidopsis genes in
Suppl. Table 2 showing the Populus orthologs expanded by wholegenome
duplication.
- Supplemental Figure S4
- The percentage of the ortholog clades of F-box proteins in Arabidopsis,
Oryza and Populus showing homology to other plant species as
revealed by tBLASTn search against the transcript assemblies of more
than 250 plant species.
- Supplemental Table S2
- Gene identification, predicted function, and citation for well-characterized Arabidopsis F-box genes.
- Supplemental Table S3
- The herbaceous monocot, herbaceous eudicot, and woody eudicot species in the plant transcript assemblies (Childs et al. 2007) used for a tBLASTn search.
- Supplemental Table S7
- Number of F-box proteins in Arabidopsis, Oryza and Populus showing homology to other plant species as revealed by tBLASTn search against the transcript assemblies from more than 250 plant species.