Research Publications

Quick Links: 20152014

Publications - 2016

A Structural Study of CESA1 Catalytic Domain of Arabidopsis Cellulose Synthesis Complex: Evidence for CESA Trimers. VG Vandavasi, DK Putnam, Q Zhang, L Petridis et al. 2016. Plant Physiology, 170(1), 123–35. doi:​10.​1104/​pp.​15.​01356.

Consolidated Bioprocessing of Populus using Clostridium (Ruminiclostridium) thermocellum: A Case Study on the Impact of Lignin Composition and Structure. Dumitrache, A., H. Akinosho, M. Rodriguez Jr., X. Meng, C. Geun Yoo, J. Natzke, N.L. Engle, R.W. Sykes, T.J. Tschaplinski, W. Muchero, A. Ragauskas, B.H. Davison, S.D. Brown. 2016. Biotechnol. for Biofuels, 9, 31. doi: 10.1186/s13068-016-0445-x.

Publications - 2015

Scaling Nitrogen and Carbon Interactions: What are the Consequences of Biological Buffering? DJ Weston, A Rogers, TJ Tschaplinski, LE Gunter, et al. 2015. Ecology and Evolution, 5(14), 2839–50. doi:10.1002/ece3.1565.

ALD1 Regulates Basal Immune Components and Early Inducible Defense Responses in Arabidopsis. Cecchini, N.M, H.W. Jung, N.L. Engle, T.J. Tschaplinski, and J.T. Greenberg. 2015. Molecular Plant-Microbe Interactions, 28(4), 455–66. doi: 10.1094/MPMI-06-14-0187-R.

ORNL Patent # 2525.2 - Key Gene Regulating Cell Wall Biosynthesis and Recalcitrance in Populus, Gene Y – US9206436 B2. Published December 8, 2015.

Computational Ranking of Yerba Mate Small Molecules Based on Their Predicted Contribution to Antibacterial Activity Against Methicillin-resistant Staphylococcus aureus. Rempe, C.S., K.P. Burris, H.L. Woo, B. Goodrich, D. Koessler Gosnell,  T.J. Tschaplinski, and C.N. Stewart, Jr. 2015. PLoS ONE, 10(5), e0123925. doi: 10.1371/journal.pone.0123925.

Pinoresinol Reductase 1 Impacts Lignin Distribution During Secondary Cell Wall Biosynthesis in Arabidopsis. Zhao, Q., Y. Zeng, Y. Yin, Y. Pu, L.A. Jackson, N.L. Engle, M.Z. Martin, T.J. Tschaplinski, S.-Y. Ding, A.J. Ragauskas, and R.A. Dixon. 2015. Phytochemistry, 112, 170–78. doi:10.1016/j.phytochem.2014.07.008.

Xylan Hydrolysis in Populus trichocarpa x P. deltoides and Model Substrates During Hydrothermal Pretreatment. Trajano, H.L., S. Pattathil, B.A. Tomkins, T.J. Tschaplinski, M.G. Hahn, G.J. Van Berkel, C.E. Wyman. 2015. Bioresource Tech. 179, 202–10. doi: 10.1016/j.biortech.2014.11.090.

Publications - 2014

Metabolic Profiling Reveals Altered Sugar and Secondary Metabolism in Response to UGPase Overexpression in Populus. 2014. BMC Plant Biology, 14, 265. doi:10.1186/s12870-014-0265-8.

The Genome of Eucalyptus grandis. 2014. Nature, 510, 356–62. doi:10.1038/nature13308.

Lignin Valorization: Improving Lignin Processing in the Biorefinery. 2014. Science, 344(6185), e1246843. doi:10.1126/science.1246843.

Functional Genomics of Drought Tolerance in Bioenergy Crops. Yin, H., C.J. Chen, J. Yang, D.J. Weston, J.–G. Chen, W. Muchero, N. Ye, T.J. Tschaplinski, S.D. Wullschleger, Z.-M. Cheng, G.A. Tuskan, and X. Yang. 2014. Critical Reviews in Plant Sci., 33(2–3), 205–224. doi: 10.1080/07352689.2014.870417.

Populus trichocarpa and Populus deltoides Exhibit Different Metabolomic Responses to Colonization by the Symbiotic Fungus Laccaria bicolor. Tschaplinski, T.J., J.M. Plett, N.L. Engle, A. Deveau, K.C. Cushman, M.Z. Martin, M.J. Doktycz, G.A. Tuskan, A. Brun, A. Kohler, F. Martin. 2014. Molecular Plant-Microbe Interactions, 27(6), 546–56. doi: 10.1094/MPMI-09-13-0286-R.

Engineering Crassulacean Acid Metabolism to Improve Water-use Efficiency. 2014. Trends Plant Sci. 19(5), 327–38. doi: 10.1016/j.tplants.2014.01.006.

Transgenic American chestnuts show enhanced blight resistance and transmit the trait to T1 progeny. Newhouse, A.E., L.D. Polin-McGuigan, K.A. Baier, K.E.R. Valletta, W.H. Rottmann, T.J. Tschaplinski, C.A. Maynard, and W.A. Powell. 2014. Plant Science, 228, 88–97. doi: 10.1016/j.plantsci.2014.04.004.

A Comparative Multidimensional LC-MS Proteomic Analysis Reveals Mechanisms for Furan Aldehyde Detoxification in Thermoanaerobacter pseudethanolicus 39E. Clarkson, S.M., S.D. Hamilton-Brehm, R.J. Giannone, N.L. Engle, T.J Tschaplinski, R.L. Hettich, and J.G. Elkins. 2014. Biotech. for Biofuels, 7, 165. doi: 10.1186/s13068-014-0165-z.

The Exometabolome of Clostridium thermocellum Reveals Overflow Metabolism at High Cellulose Loading.  Holwerda, E.K., P. Thorne, D.G. Olson, D. Amador-Noguez, N.L. Engle. T.J. Tschaplinski, J.P. van Dijken, and L.R. Lynd. 2014. Biotech. for Biofuels, 7, 155. doi:10.1186/s13068-0140155-1.

Selective Herbivory by an Invasive Cyprinid, the Rudd Scardinius erythrophthalmus. Kapuscinski, K.L., J. M. Farrell, S.V. Stehman, G.L. Boyer, D.D. Fernando, M.A. Teece, T.J. Tschaplinski. 2014. Freshwater Biol., 59(11), 2315–27. doi:10.1111/fwb.12433.

Improvement of Cellulose Catabolism in Clostridium cellulolyticum by Sporulation Abolishment and Carbon Alleviation. Li, Y., T. Xu, T.J. Tschaplinski, N.L. Engle, Y. Yang, D.E. Graham, Z. He, and J. Zhou. 2014. Biotechnol. for Biofuels, 7, 25. doi:10.1186/1754-6834-7-25.